Answer
Louvers are best treated as un-insulated portions of the wall. You can add them as a separate wall type (for example, if they are metal, metal building would probably be most appropriate) with no insulation but a wall area. COMcheck will do the area-weighted averaging for the opaque wall to calculate the overall U of the opaque wall. The impact of having an uninsulated wall area is that you will be required to “make up for that” in some other portion of the building envelope. This may mean more insulation on the rest of the wall, better windows, or more roof insulation.
Note: There is an allowance for up to 1% of wall area in “recessed equipment” in walls in Standard 90.1 if 90.1 is the code in which you are complying with.